Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna glycosylase | DI534_04350 | Not Available | Negative | 924364 - 925143 | 28598.1 |
| atp-dependent helicase | DI534_04355 | Not Available | Negative | 925416 - 930194 | 168484.0 |
| hypothetical protein | DI534_04360 | Not Available | Negative | 930239 - 930598 | 12331.0 |
| hypothetical protein | DI534_04365 | Not Available | Negative | 930868 - 931389 | 19182.0 |
| hypothetical protein | DI534_04370 | Not Available | Positive | 931592 - 932155 | 20623.5 |
| duf4916 domain-containing protein | DI534_04375 | Not Available | Positive | 932355 - 932918 | 20157.2 |
| dead/deah box helicase | DI534_04380 | Not Available | Negative | 932955 - 934565 | 55215.7 |
| hypothetical protein | DI534_04385 | Not Available | Positive | 934742 - 935275 | 18055.1 |
| hypothetical protein | DI534_04390 | Not Available | Positive | 935454 - 935762 | 11589.5 |
| hypothetical protein | DI534_04395 | Not Available | Negative | 935799 - 936368 | 20178.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
