Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 916145 - 916234 | Not Available |
| hypothetical protein | DI534_04295 | Not Available | Negative | 915589 - 916188 | 21533.7 |
| hypothetical protein | DI534_04305 | Not Available | Negative | 916375 - 916710 | 11780.8 |
| hypothetical protein | DI534_04310 | Not Available | Negative | 916769 - 917254 | 16149.7 |
| sam-dependent methyltransferase | DI534_04315 | Not Available | Negative | 917405 - 918583 | 40692.9 |
| nad(p)-dependent oxidoreductase | DI534_04320 | Not Available | Negative | 919095 - 919949 | 28537.6 |
| gtp pyrophosphokinase | DI534_04330 | Not Available | Positive | 920977 - 921645 | 25249.3 |
| llm class flavin-dependent oxidoreductase | DI534_04335 | Not Available | Positive | 921755 - 922630 | 30120.3 |
| eama family transporter | DI534_04340 | Not Available | Negative | 922702 - 923745 | 36074.0 |
| hypothetical protein | DI534_04345 | Not Available | Positive | 923757 - 924335 | 19850.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
