Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2200 domain-containing protein | DI534_04195 | Not Available | Positive | 896017 - 896361 | 12925.6 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | DI534_04200 | Not Available | Positive | 896371 - 897138 | 26720.9 |
| carboxylesterase | DI534_04205 | Not Available | Negative | 897131 - 898474 | 46683.6 |
| enoyl-coa hydratase | DI534_04210 | Not Available | Positive | 898527 - 899282 | 25801.9 |
| alkaline phosphatase | DI534_04215 | Not Available | Negative | 899390 - 900199 | 27919.4 |
| alpha-glucosidase/alpha-galactosidase | DI534_04220 | Not Available | Positive | 900285 - 901604 | 48155.5 |
| fructose-bisphosphate aldolase | DI534_04225 | Not Available | Positive | 901601 - 902449 | 28576.9 |
| amidohydrolase | DI534_04230 | Not Available | Negative | 902530 - 903537 | 37726.0 |
| abc transporter substrate-binding protein | DI534_04235 | Not Available | Positive | 903719 - 905035 | 47382.1 |
| sugar isomerase | DI534_04240 | Not Available | Positive | 905122 - 906000 | 31271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
