Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | DI534_04095 | Not Available | Negative | 876023 - 876943 | 32314.7 |
| amino acid dehydrogenase | DI534_04100 | Not Available | Negative | 876958 - 878202 | 44705.6 |
| hypothetical protein | DI534_04105 | Not Available | Negative | 878237 - 879064 | 29946.0 |
| amino acid abc transporter permease | DI534_04110 | Not Available | Negative | 879061 - 879792 | 27123.0 |
| hypothetical protein | DI534_04115 | Not Available | Negative | 879806 - 880666 | 29051.4 |
| gntr family transcriptional regulator | DI534_04120 | Not Available | Negative | 881032 - 881754 | 26754.9 |
| aryldialkylphosphatase | DI534_04125 | Not Available | Negative | 881815 - 882993 | 42445.2 |
| hypothetical protein | DI534_04130 | Not Available | Negative | 882837 - 883880 | 36681.5 |
| hypothetical protein | DI534_04135 | Not Available | Negative | 883877 - 884902 | 35403.2 |
| aspartate aminotransferase family protein | DI534_04140 | Not Available | Negative | 884899 - 886155 | 45267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
