Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_04045 | Not Available | Positive | 856482 - 857093 | 21122.0 |
| hypothetical protein | DI534_04050 | Not Available | Positive | 857198 - 859450 | 77166.0 |
| hypothetical protein | DI534_04055 | Not Available | Positive | 859475 - 861286 | 61125.9 |
| hypothetical protein | DI534_04060 | Not Available | Positive | 861283 - 863076 | 62056.3 |
| dna repair protein rada | DI534_04065 | Not Available | Negative | 863280 - 864629 | 46772.2 |
| hypothetical protein | DI534_04070 | Not Available | Positive | 864725 - 866491 | 61033.6 |
| hypothetical protein | DI534_04075 | Not Available | Positive | 866634 - 872624 | 203900.0 |
| short-chain dehydrogenase | DI534_04080 | Not Available | Negative | 872691 - 873449 | 25822.8 |
| gamma-aminobutyraldehyde dehydrogenase | DI534_04085 | Not Available | Negative | 873442 - 874977 | 54142.7 |
| hypothetical protein | DI534_04090 | Not Available | Negative | 874929 - 876020 | 38722.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
