Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | DI534_03990 | Not Available | Positive | 845547 - 846386 | 29584.4 |
| lysine--trna ligase | DI534_03995 | Not Available | Positive | 846394 - 847911 | 55166.9 |
| hypothetical protein | DI534_04000 | Not Available | Positive | 848182 - 848376 | 7152.6 |
| pirin | DI534_04005 | Not Available | Negative | 848468 - 849454 | 34854.5 |
| hypothetical protein | DI534_04010 | Not Available | Positive | 849561 - 850658 | 36646.6 |
| transcriptional regulator | DI534_04015 | Not Available | Negative | 850747 - 850974 | 8263.09 |
| hypothetical protein | DI534_04020 | Not Available | Negative | 850974 - 851741 | 25931.7 |
| hypothetical protein | DI534_04025 | Not Available | Negative | 851741 - 852319 | 19358.9 |
| ndp-hexose 4-ketoreductase | DI534_04030 | Not Available | Positive | 852561 - 855080 | 92566.0 |
| amino-acid n-acetyltransferase | DI534_04035 | Not Available | Positive | 855363 - 855860 | 18617.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
