Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DI534_03940 | Not Available | Positive | 834316 - 834804 | 17009.3 |
| duf3180 domain-containing protein | DI534_03945 | Not Available | Positive | 834801 - 835325 | 17342.7 |
| abc transporter substrate-binding protein | DI534_03950 | Not Available | Positive | 835687 - 836826 | 40596.1 |
| lactose abc transporter permease | DI534_03955 | Not Available | Positive | 837010 - 837876 | 32340.2 |
| lactose abc transporter permease | DI534_03960 | Not Available | Positive | 837950 - 838678 | 26172.0 |
| beta-galactosidase | DI534_03965 | Not Available | Positive | 838729 - 841686 | 108344.0 |
| laci family transcriptional regulator | DI534_03970 | Not Available | Positive | 841688 - 842713 | 36881.0 |
| hypothetical protein | DI534_03975 | Not Available | Positive | 842735 - 843241 | 18219.6 |
| hypothetical protein | DI534_03980 | Not Available | Positive | 843244 - 844809 | 55905.3 |
| duf2520 domain-containing protein | DI534_03985 | Not Available | Positive | 844806 - 845486 | 22703.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
