Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 824989 - 825064 | Not Available |
| hypothetical protein | DI534_03895 | Not Available | Positive | 825831 - 826568 | 25771.2 |
| hypothetical protein | DI534_03900 | Not Available | Positive | 826633 - 827916 | 42975.6 |
| inorganic diphosphatase | DI534_03905 | Not Available | Negative | 827980 - 828468 | 18088.2 |
| trna lysidine(34) synthetase tils | DI534_03910 | Not Available | Positive | 828514 - 829704 | 40027.2 |
| hypoxanthine phosphoribosyltransferase | DI534_03915 | Not Available | Positive | 829803 - 830354 | 20267.4 |
| cell division protein ftsh | DI534_03920 | Not Available | Positive | 830544 - 832559 | 73086.5 |
| gtp cyclohydrolase i fole | DI534_03925 | Not Available | Positive | 832568 - 833167 | 20839.8 |
| dihydropteroate synthase | DI534_03930 | Not Available | Positive | 833164 - 833967 | 28031.4 |
| dihydroneopterin aldolase | DI534_03935 | Not Available | Positive | 833960 - 834319 | 12853.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
