Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_03790 | Not Available | Negative | 806180 - 806683 | 17378.1 |
| neutral zinc metallopeptidase | DI534_03795 | Not Available | Positive | 806756 - 807628 | 30157.5 |
| acyl-coa dehydrogenase | DI534_03800 | Not Available | Positive | 807850 - 809967 | 76451.6 |
| potassium-transporting atpase subunit f | DI534_03805 | Not Available | Positive | 810166 - 810255 | 3016.99 |
| potassium-transporting atpase subunit kdpa | DI534_03810 | Not Available | Positive | 810255 - 811925 | 57730.3 |
| k(+)-transporting atpase subunit b | DI534_03815 | Not Available | Positive | 811931 - 814048 | 72273.0 |
| potassium-transporting atpase subunit c | DI534_03820 | Not Available | Positive | 814069 - 814683 | 20993.8 |
| histidine kinase | DI534_03825 | Not Available | Positive | 814686 - 817187 | 87590.5 |
| dna-binding response regulator | DI534_03830 | Not Available | Positive | 817184 - 817909 | 26497.0 |
| hypothetical protein | DI534_03835 | Not Available | Negative | 817906 - 819192 | 43434.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
