Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03842 family llm class f420-dependent oxidoreductase | DI534_03685 | Not Available | Negative | 776030 - 777046 | 37684.6 |
| dihydropyrimidinase | DI534_03690 | Not Available | Negative | 777117 - 778553 | 51411.1 |
| acyltransferase | DI534_03695 | Not Available | Negative | 778571 - 779419 | 32162.8 |
| gntr family transcriptional regulator | DI534_03700 | Not Available | Positive | 779518 - 780846 | 46684.8 |
| marr family transcriptional regulator | DI534_03705 | Not Available | Negative | 780872 - 781384 | 19181.9 |
| geranylgeranyl pyrophosphate synthase | DI534_03710 | Not Available | Positive | 781504 - 782595 | 39766.7 |
| hypothetical protein | DI534_03715 | Not Available | Positive | 782711 - 785002 | 82894.0 |
| lycopene cyclase domain-containing protein | DI534_03720 | Not Available | Positive | 784999 - 785331 | 11906.3 |
| hypothetical protein | DI534_03725 | Not Available | Positive | 785335 - 785649 | 10964.8 |
| prenyltransferase | DI534_03730 | Not Available | Positive | 785663 - 786538 | 30892.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
