Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_03635 | Not Available | Negative | 766266 - 767912 | 56138.6 |
| dna-formamidopyrimidine glycosylase | DI534_03640 | Not Available | Negative | 767949 - 768896 | 34619.3 |
| ribonuclease iii | DI534_03645 | Not Available | Negative | 768907 - 769605 | 24515.4 |
| 50s ribosomal protein l32 | DI534_03650 | Not Available | Negative | 769625 - 769828 | 7535.08 |
| hypothetical protein | DI534_03655 | Not Available | Negative | 769869 - 770342 | 17253.2 |
| aspartate aminotransferase family protein | DI534_03660 | Not Available | Negative | 770843 - 772159 | 46658.3 |
| abc transporter substrate-binding protein | DI534_03665 | Not Available | Negative | 772239 - 773414 | 41516.7 |
| nitrate abc transporter permease | DI534_03670 | Not Available | Negative | 773474 - 774319 | 29494.5 |
| nitrate abc transporter atp-binding protein | DI534_03675 | Not Available | Negative | 774316 - 775125 | 29215.3 |
| abc transporter permease | DI534_03680 | Not Available | Negative | 775122 - 776033 | 31612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
