Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | DI534_03585 | Not Available | Positive | 755250 - 755765 | 17915.4 |
| hypothetical protein | DI534_03590 | Not Available | Positive | 755762 - 756400 | 22946.8 |
| llm class f420-dependent oxidoreductase | DI534_03595 | Not Available | Negative | 756453 - 757457 | 35569.3 |
| signal recognition particle-docking protein ftsy | DI534_03600 | Not Available | Negative | 757557 - 758426 | 30907.1 |
| histidine phosphatase family protein | DI534_03605 | Not Available | Positive | 758487 - 759041 | 20331.9 |
| chromosome segregation protein smc | DI534_03610 | Not Available | Negative | 759062 - 762748 | 131027.0 |
| hypothetical protein | DI534_03615 | Not Available | Negative | 763188 - 763838 | 24091.7 |
| hypothetical protein | DI534_03620 | Not Available | Negative | 763929 - 764516 | 20184.8 |
| hypothetical protein | DI534_03625 | Not Available | Negative | 764774 - 765577 | 28318.5 |
| hypothetical protein | DI534_03630 | Not Available | Negative | 765675 - 766217 | 18122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
