Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_03480 | Not Available | Positive | 740139 - 740357 | 7651.61 |
| hypothetical protein | DI534_03485 | Not Available | Negative | 740382 - 740771 | 13674.1 |
| duf2469 domain-containing protein | DI534_03490 | Not Available | Negative | 740768 - 741091 | 13208.3 |
| ribonuclease hii | DI534_03495 | Not Available | Negative | 741211 - 741876 | 23456.1 |
| signal peptidase i | DI534_03500 | Not Available | Negative | 741873 - 742688 | 29527.8 |
| 50s ribosomal protein l19 | DI534_03505 | Not Available | Negative | 742815 - 743162 | 13151.9 |
| nitroreductase | DI534_03510 | Not Available | Negative | 743320 - 744132 | 30808.2 |
| methyltransferase | DI534_03520 | Not Available | Negative | 744503 - 745150 | 23825.6 |
| type iii polyketide synthase | DI534_03525 | Not Available | Negative | 745189 - 746280 | 37484.5 |
| mfs transporter | DI534_03530 | Not Available | Negative | 746277 - 746792 | 18636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
