Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DI534_03380 | Not Available | Negative | 722748 - 723467 | 25468.8 |
| hypothetical protein | DI534_03385 | Not Available | Negative | 723464 - 723757 | 10957.9 |
| sodium:proton antiporter | DI534_03390 | Not Available | Negative | 723774 - 725531 | 63110.4 |
| lytic transglycosylase domain-containing protein | DI534_03395 | Not Available | Negative | 725599 - 726162 | 19487.9 |
| diviva domain-containing protein | DI534_03400 | Not Available | Negative | 726309 - 726854 | 20301.8 |
| phosphatidate cytidylyltransferase | DI534_03405 | Not Available | Negative | 726928 - 727953 | 36847.9 |
| ribosome recycling factor | DI534_03410 | Not Available | Negative | 727953 - 728507 | 20452.5 |
| duf3097 domain-containing protein | DI534_03415 | Not Available | Negative | 728546 - 729370 | 29829.6 |
| ump kinase | DI534_03420 | Not Available | Negative | 729373 - 730101 | 25730.1 |
| elongation factor ts | DI534_03425 | Not Available | Negative | 730325 - 731152 | 29404.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
