Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_03330 | Not Available | Negative | 708062 - 708907 | 27845.7 |
| hypothetical protein | DI534_03335 | Not Available | Negative | 708904 - 710304 | 47938.6 |
| hypothetical protein | DI534_03340 | Not Available | Negative | 710301 - 710924 | 20365.0 |
| alternate-type signal peptide domain-containing protein | DI534_03345 | Not Available | Negative | 711032 - 711661 | 20560.1 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | DI534_03350 | Not Available | Positive | 712129 - 714075 | 72238.2 |
| 1,4-alpha-glucan branching enzyme | DI534_03355 | Not Available | Positive | 714077 - 716242 | 80772.1 |
| co-chaperone ybbn | DI534_03360 | Not Available | Negative | 716250 - 717167 | 31758.3 |
| hypothetical protein | DI534_03365 | Not Available | Negative | 717173 - 719002 | 62857.6 |
| hypothetical protein | DI534_03370 | Not Available | Positive | 719291 - 721630 | 83811.8 |
| ai-2e family transporter | DI534_03375 | Not Available | Positive | 721680 - 722741 | 37734.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
