Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_03175 | Not Available | Negative | 669599 - 672436 | 101222.0 |
| atp-dependent serine peptidase containing a pdz domain protein | DI534_03180 | Not Available | Negative | 672600 - 673691 | 37801.6 |
| hypothetical protein | DI534_03185 | Not Available | Positive | 673857 - 675152 | 46285.9 |
| hypothetical protein | DI534_03190 | Not Available | Negative | 675175 - 676095 | 32999.1 |
| hypothetical protein | DI534_03195 | Not Available | Positive | 676239 - 676460 | 8176.82 |
| hypothetical protein | DI534_03205 | Not Available | Negative | 677773 - 678321 | 18829.6 |
| sam-dependent methyltransferase | DI534_03210 | Not Available | Negative | 678388 - 679881 | 52251.9 |
| mfs transporter | DI534_03215 | Not Available | Negative | 679886 - 681142 | 43470.8 |
| glyoxalase | DI534_03220 | Not Available | Negative | 681172 - 681552 | 13585.2 |
| hypothetical protein | DI534_03225 | Not Available | Positive | 681664 - 682149 | 17364.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
