Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease | DI534_03125 | Not Available | Negative | 661158 - 662774 | 51989.0 |
| aminotransferase | DI534_03130 | Not Available | Positive | 662889 - 664085 | 42232.5 |
| hypothetical protein | DI534_03135 | Not Available | Positive | 664182 - 664826 | 22794.8 |
| hypothetical protein | DI534_03140 | Not Available | Positive | 664838 - 665482 | 22393.4 |
| hydrolase | DI534_03145 | Not Available | Negative | 665493 - 666311 | 29478.2 |
| hypothetical protein | DI534_03150 | Not Available | Negative | 666365 - 666586 | 8328.92 |
| hypothetical protein | DI534_03155 | Not Available | Negative | 666908 - 667366 | 16916.6 |
| hypothetical protein | DI534_03160 | Not Available | Negative | 667391 - 667954 | 21369.3 |
| Trna-met | Not Available | Not Available | Positive | 668535 - 668611 | Not Available |
| sam-dependent methyltransferase | DI534_03170 | Not Available | Negative | 668727 - 669599 | 32911.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
