Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3039 domain-containing protein | DI534_03025 | Not Available | Negative | 635902 - 636165 | 9800.66 |
| hypothetical protein | DI534_03030 | Not Available | Negative | 636248 - 637780 | 54512.1 |
| abc transporter atp-binding protein | DI534_03035 | Not Available | Negative | 637825 - 638811 | 34433.2 |
| udp-n-acetylglucosamine pyrophosphorylase | DI534_03040 | Not Available | Positive | 639215 - 639907 | 25659.4 |
| sugar abc transporter | DI534_03045 | Not Available | Positive | 639993 - 640814 | 31032.4 |
| sugar abc transporter | DI534_03050 | Not Available | Positive | 640814 - 641566 | 27866.5 |
| hypothetical protein | DI534_03055 | Not Available | Negative | 641554 - 642603 | 37715.7 |
| n-acetylneuraminate synthase | DI534_03060 | Not Available | Negative | 642855 - 643727 | 31789.1 |
| acylneuraminate cytidylyltransferase | DI534_03065 | Not Available | Negative | 643724 - 644959 | 43314.3 |
| hypothetical protein | DI534_03070 | Not Available | Negative | 644956 - 645897 | 33690.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
