Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_02975 | Not Available | Positive | 628039 - 628764 | 26064.3 |
| divalent metal cation transporter | DI534_02980 | Not Available | Negative | 628801 - 630027 | 41757.7 |
| transcriptional regulator | DI534_02985 | Not Available | Negative | 630037 - 630651 | 22027.2 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | DI534_02990 | Not Available | Negative | 630706 - 631284 | 20618.1 |
| ribonuclease ph | DI534_02995 | Not Available | Negative | 631281 - 632012 | 25966.9 |
| glutamate racemase | DI534_03000 | Not Available | Negative | 632009 - 632926 | 32189.4 |
| hypothetical protein | DI534_03005 | Not Available | Positive | 633035 - 633562 | 18949.3 |
| hypothetical protein | DI534_03010 | Not Available | Positive | 633556 - 634326 | 26184.7 |
| hypothetical protein | DI534_03015 | Not Available | Negative | 634253 - 634462 | 7776.02 |
| nicotinate phosphoribosyltransferase | DI534_03020 | Not Available | Positive | 634485 - 635789 | 45166.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
