Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone | DI534_00255 | Not Available | Positive | 45185 - 45541 | 11653.3 |
| heavy metal translocating p-type atpase | DI534_00260 | Not Available | Positive | 45538 - 47826 | 78395.4 |
| hypothetical protein | DI534_00265 | Not Available | Positive | 47853 - 48131 | 10411.7 |
| hypothetical protein | DI534_00270 | Not Available | Positive | 48161 - 48778 | 21711.9 |
| hypothetical protein | DI534_00275 | Not Available | Positive | 48863 - 49357 | 16433.6 |
| duf305 domain-containing protein | DI534_00280 | Not Available | Positive | 49467 - 50093 | 21937.1 |
| hypothetical protein | DI534_00285 | Not Available | Positive | 50292 - 51140 | 28341.0 |
| phosphoketolase | DI534_00290 | Not Available | Positive | 51193 - 53640 | 89846.0 |
| atpase p | DI534_00295 | Not Available | Positive | 53643 - 56213 | 88737.8 |
| family 65 glycosyl hydrolase | DI534_00300 | Not Available | Positive | 56233 - 59433 | 116886.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
