Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DI534_02820 | Not Available | Negative | 597804 - 598376 | 19305.2 |
| marr family transcriptional regulator | DI534_02825 | Not Available | Positive | 598462 - 598956 | 18168.8 |
| duf853 domain-containing protein | DI534_02830 | Not Available | Positive | 599053 - 600834 | 61566.4 |
| hypothetical protein | DI534_02835 | Not Available | Positive | 600831 - 602246 | 48884.1 |
| hypothetical protein | DI534_02840 | Not Available | Negative | 602237 - 602458 | 8096.68 |
| hypothetical protein | DI534_02845 | Not Available | Positive | 602555 - 602914 | 12608.8 |
| hypothetical protein | DI534_02850 | Not Available | Positive | 602814 - 603329 | 19167.8 |
| serine protease | DI534_02855 | Not Available | Negative | 603453 - 604943 | 50627.2 |
| hypothetical protein | DI534_02860 | Not Available | Positive | 605134 - 605526 | 14224.1 |
| succinate dehydrogenase | DI534_02865 | Not Available | Positive | 605556 - 607283 | 62147.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
