Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DI534_02715 | Not Available | Positive | 573739 - 574818 | 38407.1 |
| plasmid stabilization protein pare | DI534_02720 | Not Available | Negative | 574895 - 575188 | 11173.3 |
| type ii toxin-antitoxin system pard family antitoxin | DI534_02725 | Not Available | Negative | 575185 - 575418 | 8368.68 |
| hypothetical protein | DI534_02730 | Not Available | Positive | 575603 - 576100 | 17578.9 |
| hypothetical protein | DI534_02735 | Not Available | Negative | 576132 - 577175 | 37802.6 |
| hypothetical protein | DI534_02740 | Not Available | Negative | 577172 - 578470 | 46873.4 |
| hypothetical protein | DI534_02745 | Not Available | Positive | 578839 - 579855 | 37853.0 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | DI534_02755 | Not Available | Positive | 581539 - 585372 | 139831.0 |
| alpha-ketoglutarate decarboxylase | DI534_02760 | Not Available | Negative | 585487 - 585711 | 8310.74 |
| rna polymerase subunit sigma | DI534_02765 | Not Available | Negative | 585708 - 586367 | 24439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
