Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DI534_02665 | Not Available | Positive | 564006 - 565178 | 40677.6 |
| hypothetical protein | DI534_02670 | Not Available | Positive | 565175 - 566434 | 44089.1 |
| dna-binding response regulator | DI534_02675 | Not Available | Positive | 566464 - 567126 | 23584.6 |
| mfs transporter | DI534_02680 | Not Available | Negative | 567123 - 568271 | 38238.4 |
| hypothetical protein | DI534_02685 | Not Available | Negative | 568373 - 569632 | 44262.4 |
| amino acid abc transporter substrate-binding protein | DI534_02690 | Not Available | Positive | 569744 - 570598 | 29358.5 |
| abc transporter permease | DI534_02695 | Not Available | Positive | 570721 - 571494 | 28046.1 |
| peptide abc transporter atp-binding protein | DI534_02700 | Not Available | Positive | 571491 - 572225 | 26368.8 |
| nad(p)h-hydrate dehydratase | DI534_02705 | Not Available | Negative | 572278 - 573093 | 27156.4 |
| had family phosphatase | DI534_02710 | Not Available | Positive | 573116 - 573739 | 23123.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
