Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DI534_02610 | Not Available | Negative | 552217 - 553014 | 27699.2 |
| abc transporter atp-binding protein | DI534_02615 | Not Available | Negative | 553014 - 553913 | 31256.6 |
| uracil-dna glycosylase | DI534_02620 | Not Available | Negative | 554264 - 554974 | 24874.9 |
| phosphoribosyltransferase | DI534_02625 | Not Available | Negative | 554971 - 555468 | 17892.4 |
| mfs transporter | DI534_02630 | Not Available | Positive | 555510 - 556976 | 50896.4 |
| oxidoreductase | DI534_02635 | Not Available | Negative | 556981 - 557739 | 26238.4 |
| fucose 4-o-acetylase | DI534_02640 | Not Available | Positive | 557841 - 558947 | 42128.0 |
| padr family transcriptional regulator | DI534_02650 | Not Available | Negative | 560521 - 561219 | 26469.4 |
| bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase | DI534_02655 | Not Available | Positive | 561250 - 562566 | 46396.6 |
| homoserine o-acetyltransferase | DI534_02660 | Not Available | Positive | 562697 - 563902 | 42367.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
