Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_02560 | Not Available | Positive | 543986 - 544681 | 23110.2 |
| arginase | DI534_02565 | Not Available | Positive | 544728 - 545516 | 26705.6 |
| pyridine nucleotide-disulfide oxidoreductase | DI534_02570 | Not Available | Positive | 545565 - 546995 | 49417.8 |
| hypothetical protein | DI534_02575 | Not Available | Positive | 547037 - 547432 | 14336.7 |
| siderophore-interacting protein | DI534_02580 | Not Available | Negative | 547593 - 547952 | 12592.0 |
| amidase | DI534_02585 | Not Available | Negative | 548010 - 549431 | 49002.2 |
| gntr family transcriptional regulator | DI534_02590 | Not Available | Positive | 549500 - 549880 | 13830.6 |
| abc transporter atp-binding protein | DI534_02595 | Not Available | Positive | 549877 - 550791 | 32967.3 |
| abc transporter permease | DI534_02600 | Not Available | Positive | 550788 - 551561 | 27763.2 |
| n-acetyltransferase family protein | DI534_02605 | Not Available | Negative | 551622 - 552200 | 21706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
