Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subunit a | DI534_02460 | Not Available | Negative | 524492 - 525244 | 27228.7 |
| hypothetical protein | DI534_02465 | Not Available | Negative | 525404 - 525865 | 16078.1 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DI534_02470 | Not Available | Negative | 525862 - 527172 | 46709.5 |
| threonylcarbamoyl-amp synthase | DI534_02475 | Not Available | Negative | 527169 - 527846 | 23496.2 |
| hydrolase | DI534_02480 | Not Available | Positive | 527964 - 528581 | 22650.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | DI534_02485 | Not Available | Negative | 528622 - 529515 | 31168.4 |
| peptide chain release factor 1 | DI534_02490 | Not Available | Negative | 529552 - 530643 | 40199.1 |
| transcription termination factor rho | DI534_02495 | Not Available | Negative | 530647 - 532674 | 72125.8 |
| homoserine kinase | DI534_02500 | Not Available | Negative | 532731 - 533669 | 32423.9 |
| threonine synthase | DI534_02505 | Not Available | Negative | 533666 - 534763 | 38108.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
