Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase | DI534_00200 | Not Available | Negative | 35831 - 36460 | 21776.5 |
| hypothetical protein | DI534_00205 | Not Available | Negative | 36499 - 36765 | 9382.68 |
| c-type cytochrome biogenesis protein ccsb | DI534_00210 | Not Available | Negative | 36788 - 37753 | 34925.3 |
| cytochrome c biogenesis protein | DI534_00215 | Not Available | Negative | 37737 - 39374 | 58624.2 |
| prolipoprotein diacylglyceryl transferase | DI534_00220 | Not Available | Negative | 39358 - 40245 | 31654.4 |
| hypothetical protein | DI534_00225 | Not Available | Negative | 40245 - 41192 | 33485.9 |
| acetate kinase | DI534_00230 | Not Available | Positive | 42068 - 43219 | 40138.9 |
| duf305 domain-containing protein | DI534_00235 | Not Available | Negative | 43216 - 43611 | 14883.7 |
| four-helix bundle copper-binding protein | DI534_00240 | Not Available | Negative | 43704 - 44108 | 14393.2 |
| metal-sensitive transcriptional regulator | DI534_00250 | Not Available | Positive | 44851 - 45135 | 10140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
