Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | DI534_02410 | Not Available | Positive | 516541 - 517122 | 22025.0 |
| peroxide stress protein yaaa | DI534_02415 | Not Available | Negative | 517144 - 517893 | 26413.7 |
| atp-binding protein | DI534_02420 | Not Available | Negative | 517895 - 518416 | 18090.7 |
| f0f1 atp synthase subunit epsilon | DI534_02425 | Not Available | Negative | 518467 - 518724 | 8876.68 |
| f0f1 atp synthase subunit beta | DI534_02430 | Not Available | Negative | 518727 - 520193 | 52878.8 |
| f0f1 atp synthase subunit gamma | DI534_02435 | Not Available | Negative | 520212 - 521111 | 32841.1 |
| f0f1 atp synthase subunit alpha | DI534_02440 | Not Available | Negative | 521165 - 522796 | 58341.5 |
| f0f1 atp synthase subunit delta | DI534_02445 | Not Available | Negative | 522832 - 523623 | 26729.3 |
| f0f1 atp synthase subunit b | DI534_02450 | Not Available | Negative | 523624 - 524193 | 19814.5 |
| atp f0f1 synthase subunit c | DI534_02455 | Not Available | Negative | 524224 - 524445 | 7537.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
