Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DI534_02360 | Not Available | Positive | 506312 - 507211 | 32309.1 |
| nad-dependent dehydratase | DI534_02365 | Not Available | Positive | 507208 - 508227 | 37279.3 |
| aldo/keto reductase | DI534_02370 | Not Available | Positive | 508224 - 509243 | 36574.3 |
| gamma-aminobutyraldehyde dehydrogenase | DI534_02375 | Not Available | Negative | 509358 - 510794 | 51340.4 |
| asnc family transcriptional regulator | DI534_02380 | Not Available | Positive | 510909 - 511376 | 17183.7 |
| aspartate aminotransferase family protein | DI534_02385 | Not Available | Positive | 511384 - 512787 | 51788.6 |
| fad-dependent oxidoreductase | DI534_02390 | Not Available | Positive | 512790 - 514154 | 48720.6 |
| polyisoprenoid-binding protein | DI534_02395 | Not Available | Positive | 514275 - 514820 | 19652.9 |
| aldo/keto reductase | DI534_02400 | Not Available | Negative | 514886 - 515860 | 34750.8 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DI534_02405 | Not Available | Positive | 515969 - 516544 | 20054.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
