Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain-containing protein | DI534_02310 | Not Available | Negative | 490924 - 496884 | 205583.0 |
| serine/threonine protein kinase | DI534_02315 | Not Available | Negative | 496881 - 498323 | 51322.2 |
| serine/threonine-protein phosphatase | DI534_02320 | Not Available | Negative | 498326 - 499162 | 29360.2 |
| hypothetical protein | DI534_02325 | Not Available | Negative | 499159 - 499707 | 19382.4 |
| duf1851 domain-containing protein | DI534_02330 | Not Available | Negative | 499977 - 500501 | 18923.0 |
| hypothetical protein | DI534_02335 | Not Available | Positive | 501386 - 501796 | 15535.6 |
| hypothetical protein | DI534_02340 | Not Available | Positive | 501927 - 502370 | 15559.2 |
| laci family transcriptional regulator | DI534_02345 | Not Available | Negative | 502823 - 503836 | 36397.6 |
| abc transporter substrate-binding protein | DI534_02350 | Not Available | Positive | 504101 - 505360 | 44716.6 |
| sugar abc transporter permease | DI534_02355 | Not Available | Positive | 505383 - 506315 | 33465.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
