Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | DI534_02260 | Not Available | Negative | 476874 - 478247 | 48940.2 |
| abc transporter permease | DI534_02265 | Not Available | Negative | 478244 - 478981 | 26626.2 |
| abc transporter permease | DI534_02270 | Not Available | Negative | 479113 - 480027 | 33431.0 |
| spermidine/putrescine abc transporter atp-binding protein | DI534_02275 | Not Available | Negative | 480029 - 481225 | 42932.5 |
| polyamine abc transporter substrate-binding protein | DI534_02280 | Not Available | Negative | 481225 - 482433 | 44138.9 |
| hypothetical protein | DI534_02285 | Not Available | Negative | 482652 - 485381 | 95293.7 |
| hypothetical protein | DI534_02290 | Not Available | Negative | 485469 - 486257 | 27258.1 |
| transglutaminase domain-containing protein | DI534_02295 | Not Available | Negative | 486254 - 488557 | 80683.1 |
| duf58 domain-containing protein | DI534_02300 | Not Available | Negative | 488554 - 489822 | 45492.6 |
| atpase | DI534_02305 | Not Available | Negative | 489927 - 490898 | 34589.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
