Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DI534_02210 | Not Available | Negative | 465929 - 466786 | 31403.3 |
| abc transporter permease | DI534_02215 | Not Available | Negative | 466783 - 467688 | 31381.2 |
| peptide abc transporter permease | DI534_02220 | Not Available | Negative | 467711 - 468715 | 36304.9 |
| peptide abc transporter substrate-binding protein | DI534_02225 | Not Available | Negative | 468762 - 470420 | 59198.7 |
| peptidylprolyl isomerase | DI534_02230 | Not Available | Negative | 470546 - 471640 | 37030.5 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DI534_02235 | Not Available | Positive | 471639 - 472961 | 46365.5 |
| hypothetical protein | DI534_02240 | Not Available | Positive | 472967 - 473989 | 37973.9 |
| peroxiredoxin | DI534_02245 | Not Available | Negative | 474016 - 474501 | 17397.3 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DI534_02250 | Not Available | Positive | 474582 - 475934 | 46730.1 |
| asparaginase | DI534_02255 | Not Available | Positive | 475931 - 476845 | 31192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
