Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DI534_02160 | Not Available | Negative | 454962 - 456095 | 40035.3 |
| hypothetical protein | DI534_02165 | Not Available | Positive | 456166 - 457407 | 43988.4 |
| gnat family n-acetyltransferase | DI534_02170 | Not Available | Negative | 457424 - 458026 | 22167.4 |
| peptidase | DI534_02175 | Not Available | Negative | 458069 - 459385 | 45922.1 |
| duf2330 domain-containing protein | DI534_02180 | Not Available | Negative | 459493 - 460527 | 35627.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DI534_02185 | Not Available | Negative | 460524 - 461618 | 38170.4 |
| n-acetylglucosamine kinase | DI534_02190 | Not Available | Negative | 461628 - 462635 | 34145.0 |
| 6-phospho-beta-glucosidase | DI534_02195 | Not Available | Negative | 462626 - 463882 | 45914.3 |
| hypothetical protein | DI534_02200 | Not Available | Negative | 463912 - 465048 | 38122.7 |
| abc transporter atp-binding protein | DI534_02205 | Not Available | Negative | 465045 - 465932 | 32759.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
