Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DI534_02010 | Not Available | Negative | 423599 - 425728 | 77125.5 |
| hypothetical protein | DI534_02015 | Not Available | Negative | 425924 - 426289 | 13156.4 |
| acetylornithine deacetylase | DI534_02020 | Not Available | Positive | 426333 - 427658 | 46763.0 |
| hypothetical protein | DI534_02025 | Not Available | Negative | 427748 - 428629 | 31184.4 |
| aldehyde dehydrogenase | DI534_02030 | Not Available | Negative | 428729 - 429586 | 29777.4 |
| betaine-aldehyde dehydrogenase | DI534_02035 | Not Available | Negative | 429583 - 431100 | 53936.0 |
| deoxyribose-phosphate aldolase | DI534_02040 | Not Available | Negative | 431112 - 432122 | 35597.6 |
| transcriptional regulator | DI534_02045 | Not Available | Negative | 432119 - 433054 | 33171.5 |
| hypothetical protein | DI534_02050 | Not Available | Negative | 433161 - 433601 | 16456.6 |
| mfs transporter | DI534_02055 | Not Available | Negative | 433659 - 434951 | 43898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
