Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_01955 | Not Available | Negative | 410869 - 411087 | 7667.66 |
| phosphate transporter | DI534_01960 | Not Available | Negative | 411084 - 412226 | 38801.0 |
| hypothetical protein | DI534_01965 | Not Available | Positive | 412417 - 412752 | 11128.3 |
| duf3516 domain-containing protein | DI534_01970 | Not Available | Negative | 412760 - 415291 | 91991.6 |
| hypothetical protein | DI534_01980 | Not Available | Positive | 416749 - 417585 | 29645.3 |
| hypothetical protein | DI534_01985 | Not Available | Positive | 417692 - 418786 | 36136.1 |
| hypothetical protein | DI534_01990 | Not Available | Positive | 418902 - 420521 | 53794.9 |
| molecular chaperone dnaj | DI534_01995 | Not Available | Negative | 420561 - 421466 | 32019.0 |
| tryptophan synthase subunit alpha | DI534_02000 | Not Available | Positive | 421525 - 421851 | 12425.8 |
| aminodeoxychorismate lyase | DI534_02005 | Not Available | Positive | 421848 - 422723 | 30836.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
