Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_00150 | Not Available | Negative | 28238 - 29068 | 30070.5 |
| hypothetical protein | DI534_00155 | Not Available | Negative | 29076 - 29516 | 16328.3 |
| excisionase | DI534_00160 | Not Available | Negative | 29513 - 30100 | 20032.2 |
| dna primase | DI534_00165 | Not Available | Negative | 30151 - 31086 | 33057.4 |
| hypothetical protein | DI534_00170 | Not Available | Positive | 31415 - 31846 | 15838.7 |
| hypothetical protein | DI534_00175 | Not Available | Positive | 31905 - 32369 | 17223.4 |
| hypothetical protein | DI534_00180 | Not Available | Positive | 32366 - 33385 | 36780.4 |
| phospholipase | DI534_00185 | Not Available | Positive | 33382 - 34521 | 40560.3 |
| hypothetical protein | DI534_00190 | Not Available | Positive | 34662 - 35123 | 16074.9 |
| cytochrome c biogenesis protein | DI534_00195 | Not Available | Negative | 35112 - 35834 | 24912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
