Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | DI534_01905 | Not Available | Negative | 399988 - 401571 | 55927.2 |
| quinolinate synthase | DI534_01910 | Not Available | Negative | 401573 - 402862 | 46727.9 |
| nudix hydrolase | DI534_01915 | Not Available | Negative | 402889 - 403575 | 25031.8 |
| hypothetical protein | DI534_01920 | Not Available | Negative | 403656 - 404201 | 19890.6 |
| hypothetical protein | DI534_01925 | Not Available | Negative | 404267 - 404791 | 18575.4 |
| fad-binding oxidoreductase | DI534_01930 | Not Available | Negative | 404896 - 406248 | 46819.6 |
| 3-methyladenine dna glycosylase | DI534_01935 | Not Available | Positive | 406371 - 407858 | 52229.7 |
| sodium:proton antiporter | DI534_01940 | Not Available | Positive | 407899 - 408396 | 18182.4 |
| abortive phage infection protein | DI534_01945 | Not Available | Negative | 408412 - 409221 | 30462.8 |
| aspartate ammonia-lyase | DI534_01950 | Not Available | Negative | 409234 - 410781 | 54437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
