Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_01855 | Not Available | Negative | 386971 - 388020 | 35199.6 |
| hypothetical protein | DI534_01860 | Not Available | Negative | 388068 - 389951 | 65146.0 |
| hyaluronan synthase | DI534_01865 | Not Available | Negative | 389951 - 391216 | 47130.6 |
| cpbp family intramembrane metalloprotease domain-containing protein | DI534_01870 | Not Available | Negative | 391524 - 392513 | 35738.7 |
| glycine--trna ligase | DI534_01875 | Not Available | Negative | 392513 - 393898 | 53122.6 |
| aminotransferase | DI534_01880 | Not Available | Negative | 394160 - 395260 | 38173.8 |
| lysr family transcriptional regulator | DI534_01885 | Not Available | Positive | 395312 - 396322 | 34832.9 |
| hypothetical protein | DI534_01890 | Not Available | Positive | 396347 - 398059 | 59452.5 |
| cysteine desulfurase | DI534_01895 | Not Available | Negative | 397990 - 399141 | 39787.4 |
| carboxylating nicotinate-nucleotide diphosphorylase | DI534_01900 | Not Available | Negative | 399146 - 399991 | 29019.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
