Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_01800 | Not Available | Negative | 375718 - 376098 | 13995.7 |
| Trna-asn | Not Available | Not Available | Positive | 376104 - 376176 | Not Available |
| hypothetical protein | DI534_01810 | Not Available | Negative | 376197 - 377195 | 34092.9 |
| abc transporter atp-binding protein | DI534_01815 | Not Available | Negative | 377192 - 377989 | 28083.8 |
| peptide abc transporter substrate-binding protein | DI534_01820 | Not Available | Negative | 377986 - 379620 | 56939.0 |
| dna primase | DI534_01825 | Not Available | Negative | 379751 - 381640 | 68236.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | DI534_01830 | Not Available | Negative | 381681 - 383054 | 49681.3 |
| hypothetical protein | DI534_01840 | Not Available | Positive | 383993 - 384616 | 21499.3 |
| disulfide bond formation protein dsba | DI534_01845 | Not Available | Negative | 384757 - 385419 | 24334.6 |
| udp-glucose 6-dehydrogenase | DI534_01850 | Not Available | Negative | 385486 - 386901 | 50776.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
