Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division/cell wall cluster transcriptional repressor mraz | DI534_01750 | Not Available | Negative | 366914 - 367345 | 16158.2 |
| hypothetical protein | DI534_01755 | Not Available | Negative | 367614 - 367949 | 11872.8 |
| geranylgeranyl pyrophosphate synthase | DI534_01760 | Not Available | Positive | 367996 - 369126 | 40684.1 |
| aaa family atpase | DI534_01765 | Not Available | Positive | 369116 - 371269 | 78682.1 |
| branched-chain amino acid transporter azld | DI534_01770 | Not Available | Negative | 371286 - 371600 | 10632.6 |
| branched-chain amino acid abc transporter permease | DI534_01775 | Not Available | Negative | 371597 - 372256 | 22157.5 |
| atp-binding protein | DI534_01780 | Not Available | Negative | 372311 - 373198 | 31518.6 |
| hypothetical protein | DI534_01785 | Not Available | Negative | 373347 - 373676 | 12067.5 |
| dna-binding response regulator | DI534_01790 | Not Available | Negative | 373775 - 374446 | 23755.9 |
| sensor histidine kinase | DI534_01795 | Not Available | Negative | 374443 - 375639 | 41284.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
