Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | DI534_01655 | Not Available | Negative | 342369 - 343676 | 44727.1 |
| flavin oxidoreductase | DI534_01660 | Not Available | Positive | 343737 - 344246 | 18165.8 |
| dna polymerase iii subunit alpha | DI534_01665 | Not Available | Negative | 344312 - 347824 | 128910.0 |
| rna pseudouridine synthase | DI534_01670 | Not Available | Negative | 347956 - 348873 | 32965.1 |
| signal peptidase ii | DI534_01675 | Not Available | Negative | 348873 - 349412 | 19193.6 |
| cell division protein | DI534_01680 | Not Available | Negative | 349468 - 350418 | 34063.4 |
| cell division protein sepf | DI534_01685 | Not Available | Negative | 350587 - 351048 | 16278.2 |
| yggs family pyridoxal phosphate-dependent enzyme | DI534_01690 | Not Available | Negative | 351084 - 351767 | 23763.3 |
| cell division protein ftsz | DI534_01695 | Not Available | Negative | 351771 - 352925 | 39365.8 |
| hypothetical protein | DI534_01700 | Not Available | Negative | 353064 - 353819 | 26491.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
