Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin abc transporter substrate-binding protein | DI534_16630 | Not Available | Positive | 3511363 - 3512099 | 24710.4 |
| iron abc transporter | DI534_16635 | Not Available | Positive | 3512096 - 3512702 | 19810.7 |
| response regulator | DI534_16640 | Not Available | Negative | 3512747 - 3513154 | 14682.7 |
| is3 family transposase | DI534_16645 | Not Available | Negative | 3514048 - 3515213 | 43940.8 |
| hypothetical protein | DI534_16650 | Not Available | Negative | 3515396 - 3516232 | 30073.4 |
| hypothetical protein | DI534_16655 | Not Available | Negative | 3516236 - 3516589 | 12600.6 |
| is66 family insertion sequence hypothetical protein | DI534_16675 | Not Available | Positive | 3520220 - 3520488 | 9951.96 |
| is66 family transposase | DI534_16680 | Not Available | Positive | 3520537 - 3521311 | 28812.6 |
| hypothetical protein | DI534_16685 | Not Available | Positive | 3521312 - 3522389 | 40234.4 |
| x-pro aminopeptidase | DI534_16690 | Not Available | Negative | 3522390 - 3523463 | 38349.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
