Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DI534_16560 | Not Available | Positive | 3497216 - 3498712 | 51626.2 |
| serine protease | DI534_16565 | Not Available | Negative | 3498774 - 3499057 | 10200.1 |
| hypothetical protein | DI534_16580 | Not Available | Negative | 3503438 - 3503938 | 17391.0 |
| resolvase | DI534_16585 | Not Available | Positive | 3504256 - 3504933 | 24123.0 |
| hypothetical protein | DI534_16590 | Not Available | Positive | 3505313 - 3505462 | 5043.24 |
| mfs transporter | DI534_16600 | Not Available | Negative | 3507643 - 3507943 | 9879.3 |
| arsenate reductase (glutaredoxin) | DI534_16610 | Not Available | Negative | 3508558 - 3509040 | 17123.8 |
| arsenical-resistance protein | DI534_16615 | Not Available | Negative | 3509051 - 3509931 | 31034.7 |
| hypothetical protein | DI534_16620 | Not Available | Positive | 3509932 - 3510090 | 5677.66 |
| is256 family transposase | DI534_16625 | Not Available | Negative | 3510064 - 3511275 | 45027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
