Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_16510 | Not Available | Negative | 3491739 - 3492098 | 13154.4 |
| hypothetical protein | DI534_16515 | Not Available | Negative | 3491894 - 3493612 | 62641.1 |
| hypothetical protein | DI534_16520 | Not Available | Negative | 3493653 - 3493916 | 9432.96 |
| hypothetical protein | DI534_16525 | Not Available | Negative | 3493913 - 3494145 | 7691.13 |
| hypothetical protein | DI534_16530 | Not Available | Positive | 3494146 - 3494748 | 21739.9 |
| hypothetical protein | DI534_16535 | Not Available | Positive | 3494748 - 3495287 | 19651.1 |
| hypothetical protein | DI534_16540 | Not Available | Positive | 3495284 - 3495772 | 17429.8 |
| hypothetical protein | DI534_16545 | Not Available | Positive | 3495783 - 3496523 | 25702.6 |
| hypothetical protein | DI534_16550 | Not Available | Positive | 3496523 - 3496779 | 9002.64 |
| transporter | DI534_16555 | Not Available | Positive | 3496780 - 3497219 | 16005.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
