Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_16450 | Not Available | Positive | 3478944 - 3479159 | 8210.75 |
| hypothetical protein | DI534_16455 | Not Available | Positive | 3479159 - 3482312 | 109651.0 |
| Trna-ala | Not Available | Not Available | Positive | 3484149 - 3484224 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3484267 - 3484343 | Not Available |
| aaa family atpase | DI534_16480 | Not Available | Negative | 3486695 - 3487543 | 31553.0 |
| is21 family transposase | DI534_16485 | Not Available | Negative | 3487540 - 3489024 | 54779.5 |
| aspartate transaminase | DI534_16490 | Not Available | Negative | 3489128 - 3489314 | 6509.76 |
| hypothetical protein | DI534_16495 | Not Available | Positive | 3489471 - 3490598 | 42496.1 |
| hypothetical protein | DI534_16500 | Not Available | Positive | 3490588 - 3491340 | 28521.2 |
| hypothetical protein | DI534_16505 | Not Available | Negative | 3491456 - 3491730 | 10281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
