Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_16395 | Not Available | Negative | 3464514 - 3465005 | 17605.2 |
| hypothetical protein | DI534_16400 | Not Available | Negative | 3465017 - 3465427 | 15253.4 |
| hypothetical protein | DI534_16405 | Not Available | Negative | 3465567 - 3467171 | 59190.9 |
| duf159 family protein | DI534_16410 | Not Available | Positive | 3467490 - 3467987 | 18448.8 |
| potassium-transporting atpase subunit kdpa | DI534_16415 | Not Available | Positive | 3468378 - 3470087 | 58533.0 |
| potassium-transporting atpase subunit c | DI534_16425 | Not Available | Positive | 3472347 - 3472919 | 19294.2 |
| two-component sensor histidine kinase | DI534_16430 | Not Available | Positive | 3472955 - 3474263 | 47092.7 |
| xre family transcriptional regulator | DI534_16435 | Not Available | Negative | 3474728 - 3475816 | 40801.3 |
| alcohol dehydrogenase | DI534_16440 | Not Available | Positive | 3476624 - 3477595 | 35394.2 |
| excinuclease abc subunit b | DI534_16445 | Not Available | Positive | 3477958 - 3478900 | 33791.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
