Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_16345 | Not Available | Positive | 3454551 - 3454757 | 7663.49 |
| hypothetical protein | DI534_16350 | Not Available | Positive | 3454757 - 3455236 | 17833.0 |
| hypothetical protein | DI534_16355 | Not Available | Positive | 3456279 - 3456548 | 9600.36 |
| hypothetical protein | DI534_16360 | Not Available | Positive | 3456545 - 3456883 | 12531.2 |
| hypothetical protein | DI534_16365 | Not Available | Positive | 3457070 - 3457369 | 9783.44 |
| stas/sec14 domain-containing protein | DI534_16370 | Not Available | Positive | 3457795 - 3458283 | 17468.7 |
| duf159 family protein | DI534_16375 | Not Available | Positive | 3458317 - 3458485 | 6134.5 |
| hypothetical protein | DI534_16380 | Not Available | Positive | 3458486 - 3463117 | 159390.0 |
| hypothetical protein | DI534_16385 | Not Available | Positive | 3463341 - 3463934 | 22587.8 |
| hypothetical protein | DI534_16390 | Not Available | Negative | 3463949 - 3464506 | 20492.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
