Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_16295 | Not Available | Positive | 3446476 - 3447372 | 33102.1 |
| hypothetical protein | DI534_16300 | Not Available | Positive | 3447442 - 3447672 | 8018.5 |
| hypothetical protein | DI534_16305 | Not Available | Positive | 3447746 - 3448480 | 26046.3 |
| hypothetical protein | DI534_16310 | Not Available | Positive | 3448491 - 3449033 | 19012.8 |
| hypothetical protein | DI534_16315 | Not Available | Positive | 3449020 - 3450111 | 37822.8 |
| hypothetical protein | DI534_16320 | Not Available | Positive | 3450119 - 3450808 | 24726.2 |
| hypothetical protein | DI534_16325 | Not Available | Positive | 3450805 - 3452082 | 42663.0 |
| peptidoglycan-binding protein | DI534_16330 | Not Available | Positive | 3452340 - 3453185 | 29883.8 |
| hypothetical protein | DI534_16335 | Not Available | Positive | 3453723 - 3454220 | 16859.8 |
| hypothetical protein | DI534_16340 | Not Available | Positive | 3454252 - 3454554 | 10879.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
