Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | DI534_01555 | Not Available | Negative | 321989 - 323431 | 52095.4 |
| transcriptional regulator | DI534_01560 | Not Available | Positive | 323537 - 324745 | 41706.4 |
| abc transporter substrate-binding protein | DI534_01565 | Not Available | Positive | 324750 - 325847 | 37740.6 |
| abc transporter atp-binding protein | DI534_01570 | Not Available | Positive | 325918 - 326685 | 27147.8 |
| abc transporter permease | DI534_01575 | Not Available | Positive | 326682 - 327893 | 41878.4 |
| lactate 2-monooxygenase | DI534_01580 | Not Available | Positive | 327920 - 329206 | 45474.3 |
| anthranilate phosphoribosyltransferase | DI534_01585 | Not Available | Negative | 329210 - 330277 | 36772.6 |
| cytochrome b | DI534_01590 | Not Available | Positive | 330384 - 331019 | 23508.5 |
| cystathionine beta-lyase | DI534_01595 | Not Available | Positive | 331048 - 331857 | 27556.9 |
| ubiquinol-cytochrome c reductase | DI534_01600 | Not Available | Positive | 331891 - 332952 | 38902.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
