Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-binding protein | DI534_16030 | Not Available | Negative | 3381847 - 3382305 | 16188.6 |
| hypothetical protein | DI534_16035 | Not Available | Positive | 3382465 - 3382680 | 7324.55 |
| hypothetical protein | DI534_16040 | Not Available | Negative | 3382924 - 3383478 | 20946.7 |
| transcriptional regulator | DI534_16045 | Not Available | Negative | 3383478 - 3383762 | 10510.5 |
| porin | DI534_16050 | Not Available | Negative | 3384117 - 3385433 | 47948.0 |
| porin | DI534_16055 | Not Available | Negative | 3385784 - 3387103 | 48090.3 |
| hypothetical protein | DI534_16060 | Not Available | Positive | 3387521 - 3388921 | 50134.4 |
| doxx family protein | DI534_16065 | Not Available | Positive | 3388994 - 3389335 | 12284.5 |
| hypothetical protein | DI534_16070 | Not Available | Positive | 3389756 - 3389971 | 7633.85 |
| hypothetical protein | DI534_16075 | Not Available | Negative | 3390049 - 3390714 | 23927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
